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Debian Med
canu
Commits
fb82bd7c
Commit
fb82bd7c
authored
8 years ago
by
Andreas Tille
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Proper description, cme fix dpkg-control
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f9dd250c
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fb82bd7c
Source: canu
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Afif Elghraoui <afif@debian.org>
Build-Depends:
debhelper (>= 9),
libboost-dev,
libmeryl-dev,
Section: science
Priority: optional
Build-Depends: debhelper (>= 9),
libboost-dev,
libmeryl-dev,
libfilesys-df-perl
# For File::Path
perl-base,
libfilesys-df-perl,
Standards-Version: 3.9.7
Homepage: http://canu.readthedocs.org/en/latest/
Vcs-Git: https://anonscm.debian.org/git/debian-med/canu.git
Standards-Version: 3.9.8
Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/canu.git
Vcs-Git: https://anonscm.debian.org/git/debian-med/canu.git
Homepage: http://canu.readthedocs.org/en/latest/
Package: canu
Architecture: any
Depends:
${shlibs:Depends},
${misc:Depends},
${perl:Depends},
libfilesys-df-perl,
mhap (>= 2.1),
# pbdagcon,
# falconkit,
Suggests:
gridengine-client,
gnuplot,
Description: A single molecule sequence assembler
<insert long description, indented with spaces>
Depends: ${shlibs:Depends},
${misc:Depends},
${perl:Depends},
libfilesys-df-perl,
mhap (>= 2.1)
# pbdagcon,
# falconkit,
Suggests: gridengine-client,
gnuplot
Description: single molecule sequence assembler for genomes
Canu is a fork of the Celera Assembler, designed for high-noise
single-molecule sequencing (such as the PacBio RS II or Oxford
Nanopore MinION).
.
Canu is a hierarchical assembly pipeline which runs in four steps:
.
* Detect overlaps in high-noise sequences using MHAP
* Generate corrected sequence consensus
* Trim corrected sequences
* Assemble trimmed corrected sequences
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