| 1 |
seaview (1:2.4-2) UNRELEASED; urgency=low
|
| 2 |
|
| 3 |
* debian/copyright, debian/seaview.1*: added year 2008 to copyright
|
| 4 |
statements.
|
| 5 |
|
| 6 |
-- Charles Plessy <charles-debian-nospam@plessy.org> Wed, 05 Mar 2008 22:47:53 +0900
|
| 7 |
|
| 8 |
seaview (1:2.4-1) unstable; urgency=low
|
| 9 |
|
| 10 |
* New upstream version:
|
| 11 |
- Version 2.3: corrrected bug if adding/deleting/moving sequences when in
|
| 12 |
'view as proteins' mode.
|
| 13 |
- Version 2.4: PHYLIP format: user can customize the max length of names.
|
| 14 |
* debian/control:
|
| 15 |
- Suggests: muscle, clustalw (non-free). Seaview detects if they
|
| 16 |
are not present and grays the corresponding option.
|
| 17 |
- Allows the upload by Debian Maintainers.
|
| 18 |
- Checked that the package conforms to Policy 3.7.3.
|
| 19 |
* debian/copyright: made machine-readable
|
| 20 |
* MIME support:
|
| 21 |
- debian/seaview.sharedmimeinfo associates .aln suffix and
|
| 22 |
text/x-clustalw-alignment, debian/seaview.mime and
|
| 23 |
debian/seaview.desktop associate seaview with this MIME type.
|
| 24 |
- debian/rules executes dh_installmime.
|
| 25 |
* debian/seaview.1.xml: increased version number to 2.4 (no other changes
|
| 26 |
needed)
|
| 27 |
* debian/seaview.1: rebuilt with DocBook XSL Stylesheets v1.73.2.
|
| 28 |
|
| 29 |
-- Charles Plessy <charles-debian-nospam@plessy.org> Sat, 12 Jan 2008 15:30:07 +0900
|
| 30 |
|
| 31 |
seaview (1:2.2-1) unstable; urgency=low
|
| 32 |
|
| 33 |
[ Nelson A. de Oliveira ]
|
| 34 |
* Updated watch file.
|
| 35 |
|
| 36 |
[ Charles Plessy ]
|
| 37 |
* New upstream release:
|
| 38 |
- introduced interface to external alignment programs.
|
| 39 |
- Work with several alignment windows; copy and paste sequence data
|
| 40 |
between them.
|
| 41 |
* Moved the Homepage: field out from the package's description.
|
| 42 |
* Removed the XS- prefix of the Vcs fields in debian/control
|
| 43 |
* Building the manpage offline: added seaview.1 to the package, and
|
| 44 |
removed xsltproc, docbook-xml and docbook-xsl from the build-dependencies.
|
| 45 |
* Patches to Seaview:
|
| 46 |
- Refreshed.
|
| 47 |
- Suppressed xterm_to_x-terminal-emulator.patch : strange communication
|
| 48 |
problems happen between seaview and some terminal emulators, such as
|
| 49 |
gnome-terminal or konsole.
|
| 50 |
- Hardcoded the path to seaview_align.sh.
|
| 51 |
|
| 52 |
-- Charles Plessy <charles-debian-nospam@plessy.org> Sun, 18 Nov 2007 23:35:29 +0900
|
| 53 |
|
| 54 |
seaview (1:2.0-1) unstable; urgency=low
|
| 55 |
|
| 56 |
* New upstream release. Use "Props:View as proteins" to align
|
| 57 |
protein-coding DNA sequences.
|
| 58 |
|
| 59 |
-- Charles Plessy <charles-debian-nospam@plessy.org> Fri, 24 Aug 2007 00:02:33 +0900
|
| 60 |
|
| 61 |
seaview (20070615-1) unstable; urgency=low
|
| 62 |
|
| 63 |
* New upstream release correcting problems with lowercase characters.
|
| 64 |
* Converted the SVN repository which hosts the Debian source package
|
| 65 |
to use the MergeWithUpstream option.
|
| 66 |
* Moved examples to debian/examples.
|
| 67 |
* Using 'quilt' as a patch management system instead of 'dpatch'.
|
| 68 |
* Managing all the changes to the sources whith quilt.
|
| 69 |
* Adding $(misc-Depends) in debian/control.
|
| 70 |
* Debian Menu transtion: moving entry to Applications/Science/Biology.
|
| 71 |
* Manpage: automatic date update; upgrading revision number.
|
| 72 |
* Adding bibliographic reference to debian/copyright and debian/control.
|
| 73 |
* Dropping 'config.h' patch from .diff.gz.
|
| 74 |
|
| 75 |
-- Charles Plessy <charles-debian-nospam@plessy.org> Sat, 21 Jul 2007 12:43:23 +0900
|
| 76 |
|
| 77 |
seaview (20070417-1) unstable; urgency=low
|
| 78 |
|
| 79 |
* New upstream release adding processing of comments in FASTA format.
|
| 80 |
|
| 81 |
-- Charles Plessy <charles-debian-nospam@plessy.org> Sun, 29 Apr 2007 22:51:23 +0900
|
| 82 |
|
| 83 |
seaview (20070215-1) unstable; urgency=low
|
| 84 |
|
| 85 |
* New upstream release, adding a new "Edit sequence" option in the Edit menu.
|
| 86 |
* Updated manpage and converted it to Unicode.
|
| 87 |
* Add Subversion repository URL to debian/control.
|
| 88 |
* Including /usr/share/dpatch/dpatch.make in debian/rules.
|
| 89 |
|
| 90 |
-- Charles Plessy <charles-debian-nospam@plessy.org> Thu, 5 Apr 2007 09:38:08 +0900
|
| 91 |
|
| 92 |
seaview (20061005-1) unstable; urgency=low
|
| 93 |
|
| 94 |
* New upstream release. The xpm icon and its sources are now included in.
|
| 95 |
* New maintainer email: the previous one was not the intended mailing list.
|
| 96 |
* Removing options passed to x-terminal-emulator if they are not a MUST in
|
| 97 |
the policy chapter 11.8.3.
|
| 98 |
* Improved manpage.
|
| 99 |
|
| 100 |
-- Charles Plessy <charles-debian-nospam@plessy.org> Sat, 28 Oct 2006 17:27:02 +0900
|
| 101 |
|
| 102 |
seaview (20060918-1) unstable; urgency=low
|
| 103 |
|
| 104 |
* New upstream release (Closes: #357585)
|
| 105 |
* Uses muscle instead of clustalw, therefore moving to main (Closes: #357587)
|
| 106 |
* Update debian/copyright: the current licence of seaview is GPL (Closes: #357581)
|
| 107 |
* Conforms to Standards version 3.7.2 and debhelper compatibility level 5.
|
| 108 |
* Collective maintainance: Debian-Med Packaging Team is the new Maintainer.
|
| 109 |
* Outputs PS instead of PDF as Debian can not support the PDFlib.
|
| 110 |
* Uses x-terminal-emulator instead of xterm.
|
| 111 |
* Support for freedesktop menus, and nice new icon.
|
| 112 |
* Updated manpage.
|
| 113 |
|
| 114 |
-- Charles Plessy <charles-debian-nospam@plessy.org> Thu, 28 Sep 2006 12:13:53 +0900
|
| 115 |
|
| 116 |
seaview (20021127-4.1) unstable; urgency=medium
|
| 117 |
|
| 118 |
* Non-maintainer upload.
|
| 119 |
* Medium-urgency upload for RC bugfix.
|
| 120 |
* Rebuild for the C++ ABI transition. Closes: #328175.
|
| 121 |
|
| 122 |
-- Steve Langasek <vorlon@debian.org> Thu, 22 Sep 2005 02:07:07 -0700
|
| 123 |
|
| 124 |
seaview (20021127-4) unstable; urgency=low
|
| 125 |
|
| 126 |
* Cleaned up debian/rules file.
|
| 127 |
* Conforms to Standards version 3.6.1.
|
| 128 |
|
| 129 |
-- Brian R Furry <bfurry@nac.net> Sun, 30 Nov 2003 00:04:02 +0000
|
| 130 |
|
| 131 |
seaview (20021127-3) unstable; urgency=low
|
| 132 |
|
| 133 |
* Adopted by new maintainer; closes: 100261
|
| 134 |
* Conforms to Standards version 3.6.0.
|
| 135 |
|
| 136 |
-- Brian R Furry <bfurry@nac.net> Thu, 11 Sep 2003 21:12:40 -0400
|
| 137 |
|
| 138 |
seaview (20021127-2.2) unstable; urgency=low
|
| 139 |
|
| 140 |
* NMU.
|
| 141 |
* Downgrade dependency on clustalw to a recommendation, since we don't
|
| 142 |
absolutely need it and it doesn't exist on mips(el).
|
| 143 |
|
| 144 |
-- Aaron M. Ucko <ucko@debian.org> Tue, 17 Jun 2003 13:22:55 -0400
|
| 145 |
|
| 146 |
seaview (20021127-2.1) unstable; urgency=low
|
| 147 |
|
| 148 |
* NMU.
|
| 149 |
* Rebuild with Xft2-based FLTK (>= 1.1.3-2.1).
|
| 150 |
|
| 151 |
-- Aaron M. Ucko <ucko@debian.org> Wed, 7 May 2003 20:36:02 -0400
|
| 152 |
|
| 153 |
seaview (20021127-2) unstable; urgency=low
|
| 154 |
|
| 155 |
* QA upload.
|
| 156 |
* Built with g++ 3.2 and libfltk1.1c102 (closes: #176147).
|
| 157 |
|
| 158 |
-- Colin Watson <cjwatson@debian.org> Sat, 11 Jan 2003 02:50:11 +0000
|
| 159 |
|
| 160 |
seaview (20021127-1) unstable; urgency=low
|
| 161 |
|
| 162 |
* QA upload.
|
| 163 |
* New upstream release.
|
| 164 |
* Conforms to Standards version 3.5.8.
|
| 165 |
|
| 166 |
-- Matej Vela <vela@debian.org> Sun, 1 Dec 2002 22:14:33 +0100
|
| 167 |
|
| 168 |
seaview (20021010-1) unstable; urgency=low
|
| 169 |
|
| 170 |
* QA upload.
|
| 171 |
* New upstream release.
|
| 172 |
* Provide a config.h for old_file_chooser.cxx.
|
| 173 |
* debian/menu: Use `section=Apps/Science hints=Biology' (see #162812).
|
| 174 |
|
| 175 |
-- Matej Vela <vela@debian.org> Sat, 19 Oct 2002 21:26:13 +0200
|
| 176 |
|
| 177 |
seaview (20020409-1) unstable; urgency=low
|
| 178 |
|
| 179 |
* QA upload.
|
| 180 |
* New upstream version (there's no version number in the sources).
|
| 181 |
Closes: #128357.
|
| 182 |
* align.cxx:
|
| 183 |
- Handle temporary files securely (seaview 0.0 is not vulnerable).
|
| 184 |
- Use x-terminal-emulator rather than xterm or rxvt.
|
| 185 |
* seaview.1:
|
| 186 |
- List NEXUS among the supported formats.
|
| 187 |
- `-reducefonts' is no longer accepted.
|
| 188 |
* Switched to debhelper 4.
|
| 189 |
* Moved /usr/lib/seaview/seaview.help to /usr/share/seaview as
|
| 190 |
architecture-independent.
|
| 191 |
* Changed section from contrib/misc to contrib/science.
|
| 192 |
* Added menu support.
|
| 193 |
* debian/changelog: Remove obsolete Emacs local variables.
|
| 194 |
* Conforms to Standards version 3.5.7.
|
| 195 |
|
| 196 |
-- Matej Vela <vela@debian.org> Fri, 20 Sep 2002 18:25:47 +0200
|
| 197 |
|
| 198 |
seaview (0.0-6.1) unstable; urgency=low
|
| 199 |
|
| 200 |
* NMU
|
| 201 |
* Update to build against XForms 0.89. (closes: Bug#118138)
|
| 202 |
|
| 203 |
-- Doug Porter <dsp@debian.org> Mon, 12 Nov 2001 11:43:51 -0500
|
| 204 |
|
| 205 |
seaview (0.0-6) unstable; urgency=low
|
| 206 |
|
| 207 |
* Maintainer set to Debian QA Group <packages@qa.debian.org>.
|
| 208 |
|
| 209 |
-- Adrian Bunk <bunk@fs.tum.de> Fri, 24 Aug 2001 23:58:22 +0200
|
| 210 |
|
| 211 |
seaview (0.0-5) unstable; urgency=low
|
| 212 |
|
| 213 |
* Adopted by new maintainer; closes: #92802
|
| 214 |
* Moved all doc files to /usr/share/doc; closes: #91647
|
| 215 |
* Moved manpage to /usr/share/man; closes: #91064
|
| 216 |
* Updated to latest policy, and added Build-Depends.
|
| 217 |
* Removed some unnecessary files in debian dir.
|
| 218 |
|
| 219 |
-- Dr. Guenter Bechly <gbechly@debian.org> Sat, 7 Apr 2001 18:00:30 +0200
|
| 220 |
|
| 221 |
seaview (0.0-4) unstable; urgency=low
|
| 222 |
|
| 223 |
* A few examples added
|
| 224 |
* New bug in seaview_align.sh, this time fixed seriously.
|
| 225 |
|
| 226 |
-- Stephane Bortzmeyer <bortzmeyer@debian.org> Thu, 3 Jun 1999 10:07:55 +0200
|
| 227 |
|
| 228 |
seaview (0.0-3) unstable; urgency=low
|
| 229 |
|
| 230 |
* Big bug in seaview_align.sh (not all parameters were passed).
|
| 231 |
|
| 232 |
-- Stephane Bortzmeyer <bortzmeyer@debian.org> Wed, 26 May 1999 14:39:26 +0200
|
| 233 |
|
| 234 |
seaview (0.0-2) unstable; urgency=low
|
| 235 |
|
| 236 |
* No longer depends on c-shell or xterm. Closes #34700
|
| 237 |
* Manual page. Closes #34615
|
| 238 |
|
| 239 |
-- Stephane Bortzmeyer <bortzmeyer@debian.org> Tue, 25 May 1999 14:42:15 +0200
|
| 240 |
|
| 241 |
seaview (0.0-1) unstable; urgency=low
|
| 242 |
|
| 243 |
* Initial Release.
|
| 244 |
|
| 245 |
-- Stephane Bortzmeyer <bortzmeyer@debian.org> Mon, 1 Mar 1999 16:41:51 +0100
|
Parent Directory
| 
Revision Log