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Machine-readable license summary, see ‘http://dep.debian.net/deps/dep5/’.
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Name : SAMtools
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Contact : SAMtools mailing list <samtools-help@lists.sourceforge.net>
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Source : http://downloads.sourceforge.net/sourceforge/samtools/samtools-0.1.5c.tar.bz2
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Copyright : © 2008–2009, Genome Research Ltd.
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License : MIT
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Permission is hereby granted, free of charge, to any person obtaining a copy
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of this software and associated documentation files (the "Software"), to deal
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in the Software without restriction, including without limitation the rights
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to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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copies of the Software, and to permit persons to whom the Software is
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furnished to do so, subject to the following conditions:
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The above copyright notice and this permission notice shall be included in
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all copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
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THE SOFTWARE.
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Files : bgzf.*, bgzip.c
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Copyright : © 2008 Broad Institute / Massachusetts Institute of Technology
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License : MIT
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The license of the above files have been confirmed upstream and their headers
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will be corrected in the next release. See:
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http://samtools.svn.sourceforge.net/viewvc/samtools?view=rev&revision=441
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Files : razf.*
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Name : RAZF : Random Access compressed(Z) File
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Copyright : 2008, Jue Ruan <ruanjue@gmail.com>, Heng Li <lh3@sanger.ac.uk>
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License : Similar to NetBSD license.
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Redistribution and use in source and binary forms, with or without
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modification, are permitted provided that the following conditions
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are met:
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1. Redistributions of source code must retain the above copyright
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notice, this list of conditions and the following disclaimer.
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2. Redistributions in binary form must reproduce the above copyright
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notice, this list of conditions and the following disclaimer in the
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documentation and/or other materials provided with the distribution.
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THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
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ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
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ARE DISCLAIMED. IN NO EVENT SHALL THE AUTHOR OR CONTRIBUTORS BE LIABLE
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FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
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DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS
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OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
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HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
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LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
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OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
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SUCH DAMAGE.
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Files : misc/md5.*
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Name : MD5 Message Digest Algorithm
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Copyright : © 1990, RSA Data Security, Inc.
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License :
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License to copy and use this software is granted provided that
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it is identified as the "RSA Data Security, Inc. MD5 Message
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Digest Algorithm" in all material mentioning or referencing this
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software or this function.
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License is also granted to make and use derivative works
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provided that such works are identified as "derived from the RSA
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Data Security, Inc. MD5 Message Digest Algorithm" in all
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material mentioning or referencing the derived work.
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RSA Data Security, Inc. makes no representations concerning
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either the merchantability of this software or the suitability
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of this software for any particular purpose. It is provided "as
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is" without express or implied warranty of any kind.
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These notices must be retained in any copies of any part of this
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documentation and/or software.
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The above source files for MD5 support will be replaced in the next SAMtools
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release by the public domain implementation of ‘http://www.fourmilab.ch/md5/’.
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