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revision 8698 by ivomaintz-guest, Tue Nov 29 10:43:50 2011 UTC revision 10192 by ivomaintz-guest, Fri Mar 30 12:51:52 2012 UTC
# Line 4  Maintainer: Debian Med Packaging Team <d Line 4  Maintainer: Debian Med Packaging Team <d
4  Uploaders: Ivo Maintz <ivo@maintz.de>,  Uploaders: Ivo Maintz <ivo@maintz.de>,
5   Changyan Xie <panchoat@gmail.com>,   Changyan Xie <panchoat@gmail.com>,
6   Moriyoshi Koizumi <mozo@sfc.keio.ac.jp>,   Moriyoshi Koizumi <mozo@sfc.keio.ac.jp>,
7     Andreas Tille <tille@debian.org>
8  DM-Upload-Allowed: yes  DM-Upload-Allowed: yes
9  Build-Depends: debhelper (>= 7),  Build-Depends: autoconf,
  autoconf,  
10   automake,   automake,
11   swig (>= 2),   debhelper (>= 8),
12     swig2.0 | swig (>= 2),
13   ruby1.8,   ruby1.8,
14   libxml2-dev,   libxml2-dev,
15   python-dev,   python-dev,
# Line 18  Build-Depends: debhelper (>= 7), Line 19  Build-Depends: debhelper (>= 7),
19   default-jdk | openjdk-6-jdk | java-gcj-compat-dev | java-sdk,   default-jdk | openjdk-6-jdk | java-gcj-compat-dev | java-sdk,
20   octave-pkg-dev,   octave-pkg-dev,
21   python-support,   python-support,
  doxygen (>= 1.5.8),  
22   graphviz,   graphviz,
23   zlib1g-dev,   zlib1g-dev,
24   libbz2-dev,   libbz2-dev,
25   c-sharp-compiler,   mono-devel,
26     mono-gmcs,
27   cli-common-dev,   cli-common-dev,
28   cli-runtime   cli-runtime
29  Standards-Version: 3.9.2  Standards-Version: 3.9.3
30  Section: science  Section: science
31    Homepage: http://www.sbml.org/
32  Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/libsbml/trunk/  Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/libsbml/trunk/
33  Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/libsbml  Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/libsbml
34    
# Line 35  Section: libdevel Line 37  Section: libdevel
37  Provides: libsbml-dev  Provides: libsbml-dev
38  Conflicts: libsbml3-dev  Conflicts: libsbml3-dev
39  Architecture: any  Architecture: any
40  Suggests: libsbml5-doc  Depends: libsbml5 (= ${binary:Version}),
41  Depends: libsbml5 (= ${binary:Version})   ${misc:Depends}
42  Description: System Biology Markup Language library - development files  Description: System Biology Markup Language library - development files
43   LibSBML is a library designed to help you read, write, manipulate,   LibSBML is a library designed to help you read, write, manipulate,
44   translate, and validate SBML files and data streams. It is not an   translate, and validate SBML files and data streams. It is not an
# Line 50  Priority: extra Line 52  Priority: extra
52  Provides: libsbml-dbg  Provides: libsbml-dbg
53  Conflicts: libsbml3-dbg  Conflicts: libsbml3-dbg
54  Architecture: any  Architecture: any
55  Depends: libsbml5 (= ${binary:Version})  Depends: libsbml5 (= ${binary:Version}), ${misc:Depends}
56  Description: System Biology Markup Language library - debug symbols  Description: System Biology Markup Language library - debug symbols
57   LibSBML is a library designed to help you read, write, manipulate,   LibSBML is a library designed to help you read, write, manipulate,
58   translate, and validate SBML files and data streams. It is not an   translate, and validate SBML files and data streams. It is not an
# Line 63  Section: libs Line 65  Section: libs
65  Architecture: any  Architecture: any
66  Provides: libsbml  Provides: libsbml
67  Conflicts: libsbml1, libsbml2, libsbml3  Conflicts: libsbml1, libsbml2, libsbml3
 Suggests: libsbml5-doc  
68  Depends: ${shlibs:Depends},  Depends: ${shlibs:Depends},
69   ${misc:Depends}   ${misc:Depends}
70  Description: System Biology Markup Language library  Description: System Biology Markup Language library
# Line 74  Description: System Biology Markup Langu Line 75  Description: System Biology Markup Langu
75    
76  Package: libsbml5-python  Package: libsbml5-python
77  Section: python  Section: python
78  Provides: ${python:Provides},  Provides: python-sbml,
  python-sbml,  
79   libsbml-python   libsbml-python
80  Conflicts: python-sbml3,  Conflicts: python-sbml3,
81   libsbml4-python,   libsbml4-python,
82   libsbml-python   libsbml-python
83  Architecture: any  Architecture: any
 Suggests: libsbml5-python-doc  
84  Depends: ${shlibs:Depends},  Depends: ${shlibs:Depends},
85   ${misc:Depends},   ${misc:Depends},
86   ${python:Depends}   siwg2.0 | swig (>= 2)
87  Description: System Biology Markup Language library - Python bindings  Description: System Biology Markup Language library - Python bindings
88   LibSBML is a library designed to help you read, write, manipulate,   LibSBML is a library designed to help you read, write, manipulate,
89   translate, and validate SBML files and data streams. It is not an   translate, and validate SBML files and data streams. It is not an
# Line 92  Description: System Biology Markup Langu Line 91  Description: System Biology Markup Langu
91   but rather a library you can embed in your own applications.   but rather a library you can embed in your own applications.
92   This package contains the Python bindings of LibSBML.   This package contains the Python bindings of LibSBML.
93    
94  #Package: libsbml5-matlab  Package: libsbml5-matlab
95  #Section: non-free/math  Section: contrib/math
96  #Provides: libsbml-matlab  Provides: libsbml-matlab
97  #Conflicts: libsbml4-matlab  Conflicts: libsbml4-matlab
98  #Architecture: amd64  Architecture: any
99  #Suggests: libsbml5-matlab-doc  Depends: ${shlibs:Depends}, ${misc:Depends}
100  #Depends: ${shlibs:Depends}, ${misc:Depends},  Description: System Biology Markup Language library - Matlab bindings
101  # libsbml5,   LibSBML is a library designed to help you read, write, manipulate,
102  # libc6 (>= 2.3)   translate, and validate SBML files and data streams. It is not an
103  #Description: System Biology Markup Language library - Matlab bindings   application itself (though it does come with many example programs),
104  # LibSBML is a library designed to help you read, write, manipulate,   but rather a library you can embed in your own applications.
105  # translate, and validate SBML files and data streams. It is not an   This package contains the Matlab bindings of LibSBML.
 # application itself (though it does come with many example programs),  
 # but rather a library you can embed in your own applications.  
 # This package contains the Matlab bindings of LibSBML.  
106    
107  Package: libsbml5-ruby1.8  Package: libsbml5-ruby1.8
108  Section: ruby  Section: ruby
# Line 127  Provides: libsbml-java Line 123  Provides: libsbml-java
123  Conflicts: libsbml3-java,  Conflicts: libsbml3-java,
124   libsbml4-java   libsbml4-java
125  Architecture: any  Architecture: any
 Suggests: libsbml5-java-doc  
126  Depends: ${shlibs:Depends},  Depends: ${shlibs:Depends},
127   ${misc:Depends}   ${misc:Depends}
128  Description: System Biology Markup Language library - Java binding  Description: System Biology Markup Language library - Java binding
# Line 141  Package: libsbml5-perl Line 136  Package: libsbml5-perl
136  Section: perl  Section: perl
137  Provides: libsbml-perl  Provides: libsbml-perl
138  Conflicts: libsbml3-perl  Conflicts: libsbml3-perl
 Suggests: libsbml5-perl-doc  
139  Depends: ${shlibs:Depends},  Depends: ${shlibs:Depends},
140   ${perl:Depends},   ${perl:Depends},
141   ${misc:Depends}   ${misc:Depends}
# Line 156  Description: System Biology Markup Langu Line 150  Description: System Biology Markup Langu
150  Package: libsbml5-octave  Package: libsbml5-octave
151  Section: math  Section: math
152  Provides: libsbml-octave  Provides: libsbml-octave
 Suggests: libsbml5-octave-doc  
153  Depends: ${shlibs:Depends},  Depends: ${shlibs:Depends},
154   ${misc:Depends},   ${misc:Depends}
  octave3.2,  
  libc6 (>=2.4)  
155  Architecture: any  Architecture: any
156  Description: System Biology Markup Language library - Octave binding  Description: System Biology Markup Language library - Octave binding
157   LibSBML is a library designed to help you read, write, manipulate,   LibSBML is a library designed to help you read, write, manipulate,
# Line 172  Description: System Biology Markup Langu Line 163  Description: System Biology Markup Langu
163  Package: libsbml5-cil  Package: libsbml5-cil
164  Section: cli-mono  Section: cli-mono
165  Provides: libsbml-cil  Provides: libsbml-cil
 Suggests: libsbml5-cil-doc  
166  Depends: ${shlibs:Depends},  Depends: ${shlibs:Depends},
167   ${misc:Depends},   ${misc:Depends}
  ${cli:Depends}  
168  Architecture: any  Architecture: any
169  Description: System Biology Markup Language library - CLR binding  Description: System Biology Markup Language library - CLR binding
170   LibSBML is a library designed to help you read, write, manipulate,   LibSBML is a library designed to help you read, write, manipulate,
# Line 184  Description: System Biology Markup Langu Line 173  Description: System Biology Markup Langu
173   but rather a library you can embed in your own applications.   but rather a library you can embed in your own applications.
174   This package contains the CLR binding of LibSBML.   This package contains the CLR binding of LibSBML.
175    
 Package: libsbml5-doc  
 Section: doc  
 Architecture: all  
 Depends: ${misc:Depends},  
  libjs-jquery  
 Description: System Biology Markup Language library - C / C++ API docs  
  LibSBML is a library designed to help you read, write, manipulate,  
  translate, and validate SBML files and data streams. It is not an  
  application itself (though it does come with many example programs),  
  but rather a library you can embed in your own applications.  
  This package contains C / C++ API documentation of LibSBML.  
   
 Package: libsbml5-perl-doc  
 Section: doc  
 Architecture: all  
 Depends: ${misc:Depends},  
  libjs-jquery  
 Description: System Biology Markup Language library - Perl API docs  
  LibSBML is a library designed to help you read, write, manipulate,  
  translate, and validate SBML files and data streams. It is not an  
  application itself (though it does come with many example programs),  
  but rather a library you can embed in your own applications.  
  This package contains Perl API documentation of LibSBML.  
   
 Package: libsbml5-python-doc  
 Section: doc  
 Architecture: all  
 Depends: ${misc:Depends},  
  libjs-jquery  
 Description: System Biology Markup Language library - Python API docs  
  LibSBML is a library designed to help you read, write, manipulate,  
  translate, and validate SBML files and data streams. It is not an  
  application itself (though it does come with many example programs),  
  but rather a library you can embed in your own applications.  
  This package contains Python API documentation of LibSBML.  
   
 Package: libsbml5-cil-doc  
 Section: doc  
 Architecture: all  
 Depends: ${misc:Depends},  
  libjs-jquery  
 Description: System Biology Markup Language library - csharp API docs  
  LibSBML is a library designed to help you read, write, manipulate,  
  translate, and validate SBML files and data streams. It is not an  
  application itself (though it does come with many example programs),  
  but rather a library you can embed in your own applications.  
  This package contains csharp API documentation of LibSBML.  
   
 Package: libsbml5-octave-doc  
 Section: doc  
 Architecture: all  
 Depends: ${misc:Depends},  
  libjs-jquery  
 Description: System Biology Markup Language library - octave API docs  
  LibSBML is a library designed to help you read, write, manipulate,  
  translate, and validate SBML files and data streams. It is not an  
  application itself (though it does come with many example programs),  
  but rather a library you can embed in your own applications.  
  This package contains octave API documentation of LibSBML.  
   
 #Package: libsbml5-matlab-doc  
 #Section: doc  
 #Architecture: all  
 #Depends: ${misc:Depends},  
 # libjs-jquery  
 #Description: System Biology Markup Language library - matlab API docs  
 # LibSBML is a library designed to help you read, write, manipulate,  
 # translate, and validate SBML files and data streams. It is not an  
 # application itself (though it does come with many example programs),  
 # but rather a library you can embed in your own applications.  
 # This package contains matlab API documentation of LibSBML.  
   
176  Package: libsbml5-examples  Package: libsbml5-examples
177  Section: doc  Section: doc
178  Architecture: all  Architecture: all
179  Depends: libsbml5-dev (= ${binary:Version}),  Depends: ${misc:Depends}
180   ${misc:Depends}  Suggests: libsbml5-dev (= ${binary:Version})
181  Description: System Biology Markup Language library -- example files  Description: System Biology Markup Language library -- example files
182   LibSBML is a library designed to help you read, write, manipulate,   LibSBML is a library designed to help you read, write, manipulate,
183   translate, and validate SBML files and data streams. It is not an   translate, and validate SBML files and data streams. It is not an
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