[debian-med] Log of /trunk/packages/libsbml

Revision 10356 - Directory Listing
Modified Tue Apr 10 12:01:06 2012 UTC (13 months, 1 week ago) by moeller

Ivo uses Matlab with SBML in his daily routine. There is no way he
can maintain the package without that Matlab link.  Octave is not a
substitute, was tested. We once came up with this approach of having
the control file adapted to show and build the libsbml5-matlab package
when the development files for Matlab are available and not if not.
This way, everything works fine on all architectures, with (amd64 only)
Matlab or without.

Mathworks had sent me a license for free only to help with Debian
packaging when I sponsored the initial package. Maybe we should mention
that somewhere and seek some additional permanent way of support through
them.  Matlab is surprisingly important to many in system biology, so
we should not ignore it. I have removed the other uploaders of libsbml5
for the moment. Those wishing to collaborate with Ivo on the maintenance
of the SBML packages please have a chat with him, first.

Cheers,

Steffen

Revision 10349 - Directory Listing
Modified Thu Apr 5 20:22:12 2012 UTC (13 months, 2 weeks ago) by alteholz

use dependency on swig only

Revision 10288 - Directory Listing
Modified Tue Apr 3 17:16:20 2012 UTC (13 months, 2 weeks ago) by alteholz

prepare release

Revision 10281 - Directory Listing
Modified Tue Apr 3 12:42:11 2012 UTC (13 months, 2 weeks ago) by ivomaintz-guest

repaired the build process for building without matlab

Revision 10192 - Directory Listing
Modified Fri Mar 30 12:51:52 2012 UTC (13 months, 3 weeks ago) by ivomaintz-guest

debian/changelog: updated the package to 5.4.1-2
debian/docs is not used

Revision 10189 - Directory Listing
Modified Fri Mar 30 12:16:20 2012 UTC (13 months, 3 weeks ago) by ivomaintz-guest

some tweaks regarding lintian remarks

Revision 10170 - Directory Listing
Modified Thu Mar 29 21:01:33 2012 UTC (13 months, 3 weeks ago) by tille

Tagged 5.4.1-1

Revision 10169 - Directory Listing
Modified Thu Mar 29 21:00:38 2012 UTC (13 months, 3 weeks ago) by tille

Added closed bug; upload to unstable

Revision 10162 - Directory Listing
Modified Thu Mar 29 16:16:10 2012 UTC (13 months, 3 weeks ago) by ivomaintz-guest

a lot of changes to remove hardcoded dependencies, fix the install process for different architectures (see debian/changelog)

Revision 10127 - Directory Listing
Modified Wed Mar 28 14:49:33 2012 UTC (13 months, 3 weeks ago) by ivomaintz-guest

changed debian/copyright to be DEP5 compatible

Revision 10123 - Directory Listing
Modified Wed Mar 28 13:06:19 2012 UTC (13 months, 3 weeks ago) by tille

No point in installing debian/README.source

Revision 10122 - Directory Listing
Modified Wed Mar 28 13:05:06 2012 UTC (13 months, 3 weeks ago) by tille

Add citation information

Revision 10121 - Directory Listing
Modified Wed Mar 28 12:47:53 2012 UTC (13 months, 3 weeks ago) by tille

Fix get-orig-source target and remove hints from README.source how to do this manually

Revision 10120 - Directory Listing
Modified Wed Mar 28 12:43:56 2012 UTC (13 months, 3 weeks ago) by tille

Commit changelog entry according to latest change

Revision 10119 - Directory Listing
Modified Wed Mar 28 12:43:06 2012 UTC (13 months, 3 weeks ago) by tille

Rename README to some default name

Revision 10118 - Directory Listing
Modified Wed Mar 28 11:39:52 2012 UTC (13 months, 3 weeks ago) by ivomaintz-guest

Added the "Closes: #665837" entry

Revision 10117 - Directory Listing
Modified Wed Mar 28 11:10:31 2012 UTC (13 months, 3 weeks ago) by ivomaintz-guest

added the dependecy to swig for libsbml5-python
re-added debian/control.in - it allows to build libsbml5-matlab, if matlab is found

Revision 10110 - Directory Listing
Modified Tue Mar 27 06:22:38 2012 UTC (13 months, 3 weeks ago) by tille

Removed debian/control.in - this file can be of some use in connection with cdbs but here it seems to serve basically the use of a backup file and might lead to confusion

Revision 10109 - Directory Listing
Modified Tue Mar 27 06:19:04 2012 UTC (13 months, 3 weeks ago) by tille

Debhelper 8; Added Homepage field in debian/control; removed useless template comments in debian/rules

Revision 10108 - Directory Listing
Modified Tue Mar 27 06:11:51 2012 UTC (13 months, 3 weeks ago) by tille

Please always tag unreleased changelog paragraphs with UNRELEASED

Revision 9913 - Directory Listing
Modified Wed Mar 7 08:50:24 2012 UTC (14 months, 2 weeks ago) by tille

Somehow the lcoses statements of initial upload were lost

Revision 9778 - Directory Listing
Modified Fri Feb 24 16:35:39 2012 UTC (14 months, 3 weeks ago) by ivomaintz-guest

updated to 5.4.1
debian/rules now detects the libsbml-version with dpkg-parsechangelog

Revision 9746 - Directory Listing
Modified Tue Feb 21 17:49:01 2012 UTC (14 months, 4 weeks ago) by ivomaintz-guest

updated libsbml to version 5.4.0

Revision 9524 - Directory Listing
Modified Wed Feb 1 15:44:05 2012 UTC (15 months, 2 weeks ago) by tille

Tagged 5.2.0-1 as uploaded

Revision 9523 - Directory Listing
Modified Wed Feb 1 15:40:33 2012 UTC (15 months, 2 weeks ago) by tille

Reverted r9267: There is no point in closing previosely archived bugs and the package was just uploaded anyway

Revision 9502 - Directory Listing
Modified Tue Jan 31 16:05:36 2012 UTC (15 months, 2 weeks ago) by ivomaintz-guest

first commit of the libsbml4

Revision 9267 - Directory Listing
Modified Thu Jan 12 14:21:51 2012 UTC (16 months, 1 week ago) by moeller

Found two bugs to associated with libsbml ... where has it gone, btw?

Revision 9251 - Directory Listing
Modified Wed Jan 11 15:52:48 2012 UTC (16 months, 1 week ago) by moeller

Suggesting -dev from examples rather than depending on it.

Revision 8997 - Directory Listing
Modified Fri Dec 16 13:02:37 2011 UTC (17 months ago) by ivomaintz-guest

fixed the build rules for octave

Revision 8698 - Directory Listing
Modified Tue Nov 29 10:43:50 2011 UTC (17 months, 3 weeks ago) by ivomaintz-guest

updated the control.in for libsbml 5.2.0

Revision 8595 - Directory Listing
Modified Thu Nov 17 13:47:35 2011 UTC (18 months ago) by ivomaintz-guest

added the get-orig-source target
update from upstream

Revision 7933 - Directory Listing
Modified Mon Sep 26 10:52:47 2011 UTC (19 months, 3 weeks ago) by ivomaintz-guest

debian/rules checks now for matlab and modifies the debian/control file

Revision 7916 - Directory Listing
Modified Sat Sep 24 09:37:42 2011 UTC (19 months, 3 weeks ago) by ivomaintz-guest

added matlab suppport (non-free)

Revision 7912 - Directory Listing
Modified Fri Sep 23 14:32:53 2011 UTC (19 months, 3 weeks ago) by moeller

control build dependencies adjusted
explaining patches.

Revision 7911 - Directory Listing
Modified Fri Sep 23 14:20:34 2011 UTC (19 months, 3 weeks ago) by moeller

Some patches for the sanity of the build process.

Revision 7910 - Directory Listing
Modified Fri Sep 23 11:13:08 2011 UTC (19 months, 3 weeks ago) by moeller

debian/watch became case insensitive

Revision 7900 - Directory Listing
Modified Thu Sep 22 13:47:07 2011 UTC (19 months, 4 weeks ago) by ivomaintz-guest

added the documentation packages for octave, cil, removed matlab bindings

Revision 7889 - Directory Listing
Modified Tue Sep 20 11:45:41 2011 UTC (20 months ago) by ivomaintz-guest

readded trunk
updated the libsbml version

Revision 7831 - Directory Listing
Modified Fri Sep 16 17:39:25 2011 UTC (20 months ago) by alteholz-guest

set mergeWithUpstream 1 for svn-buildpackage

Revision 7815 - Directory Listing
Modified Thu Sep 15 15:47:39 2011 UTC (20 months ago) by ivomaintz-guest

first try to build libsbml5

Revision 4187 - Directory Listing
Modified Thu Oct 8 05:03:07 2009 UTC (3 years, 7 months ago) by naoliv

s/Debian-Med/Debian Med

Revision 3505 - Directory Listing
Modified Fri Jun 19 08:30:47 2009 UTC (3 years, 11 months ago) by moriyoshi-guest

* Forgot to add this file.

Revision 3504 - Directory Listing
Modified Fri Jun 19 08:27:45 2009 UTC (3 years, 11 months ago) by moriyoshi-guest

* Synching with my local repository.

Revision 3109 - Directory Listing
Modified Tue Feb 10 14:06:11 2009 UTC (4 years, 3 months ago) by plessy

Updated Steffen's email address.

Revision 3108 - Directory Listing
Modified Tue Feb 10 13:52:49 2009 UTC (4 years, 3 months ago) by hanska-guest

Initial debian/control cleanup

Revision 3107 - Directory Listing
Modified Tue Feb 10 13:51:52 2009 UTC (4 years, 3 months ago) by hanska-guest

Using dh7

Revision 3106 - Directory Listing
Modified Tue Feb 10 13:37:34 2009 UTC (4 years, 3 months ago) by hanska-guest

Cleaning debian/changelog

Revision 2451 - Directory Listing
Modified Tue Sep 2 01:04:28 2008 UTC (4 years, 8 months ago) by moriyoshi-guest

* Typos.

Revision 2450 - Directory Listing
Modified Tue Sep 2 00:59:26 2008 UTC (4 years, 8 months ago) by moriyoshi-guest

* Revert some unintended changes.
* Fix Standards-Version.

Revision 2449 - Directory Listing
Modified Mon Sep 1 23:57:57 2008 UTC (4 years, 8 months ago) by moriyoshi-guest

* no contrib ..

Revision 2448 - Directory Listing
Modified Mon Sep 1 23:55:50 2008 UTC (4 years, 8 months ago) by moriyoshi-guest

* Upstream update.

Revision 2256 - Directory Listing
Modified Fri Jul 18 00:52:59 2008 UTC (4 years, 10 months ago) by moriyoshi-guest

* Import my local copies of libsbml build files.

Revision 1315 - Directory Listing
Modified Wed Feb 6 12:40:57 2008 UTC (5 years, 3 months ago) by hanska-guest

Fixing tagged revision

Revision 1314 - Directory Listing
Modified Wed Feb 6 12:40:13 2008 UTC (5 years, 3 months ago) by hanska-guest

* New upstream release

Revision 1313 - Directory Listing
Modified Wed Feb 6 12:39:23 2008 UTC (5 years, 3 months ago) by hanska-guest

[svn-buildpackage] Tagging libsbml (3.0.0beta2-1)

Revision 1312 - Directory Listing
Modified Wed Feb 6 12:39:08 2008 UTC (5 years, 3 months ago) by hanska-guest

Creating tags/ directory.

Revision 1311 - Directory Listing
Modified Wed Feb 6 12:22:49 2008 UTC (5 years, 3 months ago) by hanska-guest

Updating Standards-Version to 3.7.3

Revision 1310 - Directory Listing
Modified Wed Feb 6 11:48:02 2008 UTC (5 years, 3 months ago) by hanska-guest

* Using DM-Upload-Allowed instead of XS-DM-Upload-Allowed
* Added ?rev=0&sc=0 to Vcs-Browser fields
* Sanitized Vcs-* fields

Revision 844 - Directory Listing
Modified Wed Nov 21 01:00:15 2007 UTC (5 years, 6 months ago) by charles-guest

Removing obsolete XS- prefix

Revision 414 - Directory Listing
Modified Thu Aug 23 19:10:22 2007 UTC (5 years, 8 months ago) by naoliv

It's the watch file party! :-D

Revision 290 - Directory Listing
Modified Mon May 21 03:34:36 2007 UTC (6 years ago) by panchoat-guest

upstream update, remove all bindings temporary

Revision 224 - Directory Listing
Modified Sun Mar 4 14:02:26 2007 UTC (6 years, 2 months ago) by charles-guest

Declaring VCS in debian/control

Revision 196 - Directory Listing
Modified Wed Feb 7 09:17:28 2007 UTC (6 years, 3 months ago) by moriyoshi-guest

* Reenable java support in dicussion with Steffen.
* Remove gcc / g++ dependencies and add build-essentials instead.
* Use java-compiler for flexibility.

Revision 195 - Directory Listing
Modified Tue Feb 6 10:04:28 2007 UTC (6 years, 3 months ago) by moriyoshi-guest

* Add deb-generated files to svn:ignore

Revision 194 - Directory Listing
Modified Tue Feb 6 10:01:57 2007 UTC (6 years, 3 months ago) by moriyoshi-guest

* Add matlib support patch to 00list
* Add patch to cope with a swig oddity (reproducible with 1.3.29)

Revision 193 - Directory Listing
Modified Tue Feb 6 10:00:42 2007 UTC (6 years, 3 months ago) by moriyoshi-guest

* Silencer (`-') is only valid before the command line.

Revision 192 - Directory Listing
Modified Tue Feb 6 09:42:06 2007 UTC (6 years, 3 months ago) by moriyoshi-guest

* Add / fix build dependencies

Revision 191 - Directory Listing
Modified Tue Feb 6 09:25:26 2007 UTC (6 years, 3 months ago) by moriyoshi-guest

* Remove redundant file.

Revision 188 - Directory Listing
Modified Mon Feb 5 14:47:09 2007 UTC (6 years, 3 months ago) by smoe-guest
Copied from: libsbml revision 187

Corrected the location of the svn-injected libsbml.

Revision 187 - Directory Listing
Modified Mon Feb 5 14:42:00 2007 UTC (6 years, 3 months ago) by smoe-guest
Original Path: libsbml

[svn-inject] Applying Debian modifications to trunk

Revision 186 - Directory Listing
Added Mon Feb 5 14:41:45 2007 UTC (6 years, 3 months ago) by smoe-guest
Original Path: libsbml

Creating trunk directory

	ViewVC Help
Powered by ViewVC 1.1.5