Log of /trunk/packages/last-align/trunk

---

Revision 10748 - Directory Listing
Modified Mon May 7 23:46:49 2012 UTC (13 months, 1 week ago) by plessy

Restore xz compression and stop pre-depending on dpkg.

---

Revision 10728 - Directory Listing
Modified Mon May 7 12:56:40 2012 UTC (13 months, 1 week ago) by tille

Upload to unstable and mention bug closed by new version

---

Revision 10727 - Directory Listing
Modified Mon May 7 12:46:57 2012 UTC (13 months, 1 week ago) by tille

Make Source field more generic

---

Revision 10726 - Directory Listing
Modified Mon May 7 12:44:12 2012 UTC (13 months, 1 week ago) by tille

removed to use upstream install target (which also installs lastex)

---

Revision 10725 - Directory Listing
Modified Mon May 7 12:42:56 2012 UTC (13 months, 1 week ago) by tille

New upstream version; switch from cdbs to dh

---

Revision 10448 - Directory Listing
Modified Fri Apr 20 04:26:04 2012 UTC (14 months ago) by plessy

Retroactively mention that #667939 was closed in 198-1.

---

Revision 10447 - Directory Listing
Modified Fri Apr 20 04:23:33 2012 UTC (14 months ago) by plessy

Summarise LAST license in debian/copyright header.

---

Revision 10446 - Directory Listing
Modified Fri Apr 20 04:21:00 2012 UTC (14 months ago) by plessy

The Reference field contains a sequence of mappings.

---

Revision 10445 - Directory Listing
Modified Fri Apr 20 04:16:30 2012 UTC (14 months ago) by plessy

cme fix dpkg-copyright.

---

Revision 10245 - Directory Listing
Modified Mon Apr 2 12:44:20 2012 UTC (14 months, 2 weeks ago) by tille

Upload to unstable

---

Revision 10244 - Directory Listing
Modified Mon Apr 2 12:30:00 2012 UTC (14 months, 2 weeks ago) by tille

Enable building with hardening flags (debhelper 9)

---

Revision 10243 - Directory Listing
Modified Mon Apr 2 12:23:37 2012 UTC (14 months, 2 weeks ago) by tille

New upstream version; Simplified downloading original source

---

Revision 9952 - Directory Listing
Modified Thu Mar 8 13:43:25 2012 UTC (15 months, 1 week ago) by tille

Upload to unstable

---

Revision 9951 - Directory Listing
Modified Thu Mar 8 13:36:19 2012 UTC (15 months, 1 week ago) by tille

Removed duplicate entries for DOI/PMID

---

Revision 9950 - Directory Listing
Modified Thu Mar 8 13:35:13 2012 UTC (15 months, 1 week ago) by tille

New upstream version

---

Revision 9702 - Directory Listing
Modified Sat Feb 18 01:23:39 2012 UTC (16 months ago) by plessy

debian/upstream: Moved DOI and PMID to the Reference namespace.

---

Revision 9492 - Directory Listing
Modified Sun Jan 29 03:35:57 2012 UTC (16 months, 3 weeks ago) by plessy

Renamed debian/upstream-metadata.yaml to debian/upstream.

---

Revision 8262 - Directory Listing
Modified Sat Oct 22 09:41:28 2011 UTC (19 months, 4 weeks ago) by plessy

New upstream release adding a new command.

No new license nor copyright statement.

---

Revision 8261 - Directory Listing
Modified Sat Oct 22 08:52:14 2011 UTC (19 months, 4 weeks ago) by plessy

Pre-depend on dpkg (>= 1.15.6) for Ubuntu.

Discussion: http://lists.debian.org/CAEwx8oTbApKXKCEkbHnP5rM6H1StEohEHxYBH0knew2LfSDmsQ@mail.gmail.com

---

Revision 7844 - Directory Listing
Modified Sat Sep 17 11:57:58 2011 UTC (21 months ago) by plessy

Uploaded new upstream relase (no new copyright nor license), compressed with xz.

---

Revision 7843 - Directory Listing
Modified Sat Sep 17 10:32:14 2011 UTC (21 months ago) by plessy

Compress source package with xz.

---

Revision 7842 - Directory Listing
Modified Sat Sep 17 10:26:38 2011 UTC (21 months ago) by plessy

Normalised by loading and saving with ‘config-edit -application dpkg-copyright’.

---

Revision 7841 - Directory Listing
Modified Sat Sep 17 10:25:10 2011 UTC (21 months ago) by plessy

Corrected VCS URLs.

---

Revision 7183 - Directory Listing
Modified Thu Jun 30 05:04:33 2011 UTC (23 months, 3 weeks ago) by plessy

New upstream release (no new copyright holder or license).

---

Revision 6865 - Directory Listing
Modified Sat May 28 15:49:14 2011 UTC (2 years ago) by malat-guest

Make sure GZIP has option --best and --no-name

---

Revision 6838 - Directory Listing
Modified Mon May 16 13:05:56 2011 UTC (2 years, 1 month ago) by plessy

Uploaded last-align_171-1_amd64.changes.

---

Revision 6837 - Directory Listing
Modified Mon May 16 11:49:40 2011 UTC (2 years, 1 month ago) by plessy

Added missing statements and validated with config-edit.

I used the full URL to the source, as a bookmark to the last
version where the copyright was checked.

---

Revision 6836 - Directory Listing
Modified Mon May 16 11:42:03 2011 UTC (2 years, 1 month ago) by plessy

Install changelog through CDBS (debian/rules, debian/docs).

---

Revision 6835 - Directory Listing
Modified Mon May 16 11:30:30 2011 UTC (2 years, 1 month ago) by plessy

Applied upstream, deleted.

---

Revision 6833 - Directory Listing
Modified Sun May 15 11:32:32 2011 UTC (2 years, 1 month ago) by plessy

New upstream release accepting gcc-4.6.patch.

---

Revision 6763 - Directory Listing
Modified Wed May 4 11:51:47 2011 UTC (2 years, 1 month ago) by tille

Upload to unstable

---

Revision 6755 - Directory Listing
Modified Tue May 3 10:32:41 2011 UTC (2 years, 1 month ago) by plessy

Let's close Launchpad's bug as well.

---

Revision 6742 - Directory Listing
Modified Mon May 2 14:12:33 2011 UTC (2 years, 1 month ago) by tille

Fix #625084.  However the package is currently not buildable because help2man is not installable in unstable.

---

Revision 6248 - Directory Listing
Modified Fri Mar 11 22:51:24 2011 UTC (2 years, 3 months ago) by tille

New upstream version + minor changes to adapt to it; debhelper 8

---

Revision 5515 - Directory Listing
Modified Thu Nov 25 20:03:51 2010 UTC (2 years, 6 months ago) by tille

New upstream version

---

Revision 5442 - Directory Listing
Modified Wed Nov 17 11:07:52 2010 UTC (2 years, 7 months ago) by tille

New upstream source; changed get-orig-source target to always obtain latest version (not version from changelog)

---

Revision 5020 - Directory Listing
Modified Sat Jul 10 05:04:17 2010 UTC (2 years, 11 months ago) by tille

New upstream version

---

Revision 4901 - Directory Listing
Modified Thu Jun 24 10:06:18 2010 UTC (2 years, 11 months ago) by tille

Adapted doc-base to upstream documents, help2man created manpage for maf-convert, final upload of new upstream version

---

Revision 4829 - Directory Listing
Modified Sun May 23 14:43:12 2010 UTC (3 years ago) by plessy

Corrected debian/NEWS and added upstream-metadata.yaml.

---

Revision 4818 - Directory Listing
Modified Sun May 23 11:50:52 2010 UTC (3 years ago) by plessy

Preparing upload of new upstream release.

 * Correct build-depends as the package can not be built in Lenny without
   modification or backport.
 * Make get-orig-source more conformant (tarball name) and resilient
   (stable MD5 sum).

---

Revision 4693 - Directory Listing
Modified Mon Mar 29 10:54:41 2010 UTC (3 years, 2 months ago) by tille

New upstream version, Source format 3.0 (quilt)

---

Revision 4660 - Directory Listing
Modified Thu Mar 11 14:44:12 2010 UTC (3 years, 3 months ago) by tille

New upstream version

---

Revision 4622 - Directory Listing
Modified Thu Feb 18 13:53:36 2010 UTC (3 years, 4 months ago) by tille

New upstream version

---

Revision 4298 - Directory Listing
Modified Tue Nov 3 10:24:04 2009 UTC (3 years, 7 months ago) by tille

New upstream version

---

Revision 4187 - Directory Listing
Modified Thu Oct 8 05:03:07 2009 UTC (3 years, 8 months ago) by naoliv

s/Debian-Med/Debian Med

---

Revision 4151 - Directory Listing
Modified Mon Oct 5 10:45:46 2009 UTC (3 years, 8 months ago) by tille

New upstream version which provides --help option for all executables - so we can use help2man in all cases, but writing real man pages would be better because no drastic changes are planned by upstream.  Any volunteer?

---

Revision 4084 - Directory Listing
Modified Wed Sep 30 08:04:40 2009 UTC (3 years, 8 months ago) by tille

Recommends: python, forewarded patch upstream, upload to unstable

---

Revision 4083 - Directory Listing
Modified Wed Sep 30 07:34:55 2009 UTC (3 years, 8 months ago) by tille

The python scripts need python-imaging

---

Revision 4081 - Directory Listing
Modified Tue Sep 29 21:53:09 2009 UTC (3 years, 8 months ago) by tille

Not yet ready for upload, pbuilder has trouble with help2man

---

Revision 4080 - Directory Listing
Modified Tue Sep 29 21:44:08 2009 UTC (3 years, 8 months ago) by tille

Add missing description of maf2html

---

Revision 4079 - Directory Listing
Modified Tue Sep 29 21:41:38 2009 UTC (3 years, 8 months ago) by tille

Make sure manpages will be compressed

---

Revision 4078 - Directory Listing
Modified Tue Sep 29 21:27:48 2009 UTC (3 years, 8 months ago) by tille

Trying to create manpages via help2man wherever possible

---

Revision 3509 - Directory Listing
Modified Fri Jun 19 12:02:05 2009 UTC (4 years ago) by plessy

New upstream release able to use sequence quality scores.

---

Revision 3394 - Directory Listing
Modified Mon May 18 14:56:48 2009 UTC (4 years, 1 month ago) by plessy

New upstream release.

---

Revision 3300 - Directory Listing
Modified Tue Apr 21 01:12:35 2009 UTC (4 years, 2 months ago) by plessy

New upstream release (minor changes).

---

Revision 3274 - Directory Listing
Modified Wed Apr 8 11:19:24 2009 UTC (4 years, 2 months ago) by plessy

New upstream relase.

 * New upstream release.
   - maf-join.py: joins pairwise alignments into multiple alignments.
   - Changed lastal default gap existence cost for DNA to 7.
   - Changed lastal default gapped score threshold for DNA to 40.
   - maf-swap.py: Added -n option to move any sequence to the top.
   - Allow suffixes K(ibibyte), M(ebibyte), and G(ibibyte) for sizes.
   - Plus other bugfixes and improvements, please refer Upstream's changelog.
 * Incremented Standards-Version in debian/control to reflect conformance
   with Policy 3.8.1 (no changes needed).
 * Simplified machine-readable debian/copyright file.
 * last-align.doc-base.last-align-scripts: last-scripts.txt is now compressed. 

---

Revision 3168 - Directory Listing
Modified Tue Mar 10 11:12:29 2009 UTC (4 years, 3 months ago) by plessy

New upstream release.

---

Revision 3077 - Directory Listing
Modified Mon Feb 2 05:09:39 2009 UTC (4 years, 4 months ago) by plessy

New upstream release breaking backward compatibility.

---

Revision 2863 - Directory Listing
Modified Sun Dec 28 12:36:12 2008 UTC (4 years, 5 months ago) by plessy

New upstream release.

---

Revision 2777 - Directory Listing
Modified Sat Dec 13 14:48:55 2008 UTC (4 years, 6 months ago) by plessy

Include new files that were added after the first check.

---

Revision 2670 - Directory Listing
Modified Thu Nov 13 06:58:59 2008 UTC (4 years, 7 months ago) by plessy

One more renaming and sent to NEW.

---

Revision 2669 - Directory Listing
Modified Thu Nov 13 05:25:53 2008 UTC (4 years, 7 months ago) by plessy

Corrected inversion that prevented the binary-fixup.

---

Revision 2668 - Directory Listing
Modified Thu Nov 13 05:11:57 2008 UTC (4 years, 7 months ago) by plessy

New upstream version, typo correction and extension removal.

---

Revision 2480 - Directory Listing
Modified Thu Sep 11 07:38:54 2008 UTC (4 years, 9 months ago) by plessy

New upstream release.

---

Revision 2479 - Directory Listing
Modified Thu Sep 11 06:56:57 2008 UTC (4 years, 9 months ago) by plessy

[svn-inject] Applying Debian modifications to trunk

---

Revision 2478 - Directory Listing
Modified Thu Sep 11 06:56:34 2008 UTC (4 years, 9 months ago) by plessy
Copied from: trunk/packages/last-align/branches/upstream/current revision 2477

[svn-inject] Forking last-align source to Trunk

---

Revision 2475 - Directory Listing
Added Thu Sep 11 06:55:41 2008 UTC (4 years, 9 months ago) by plessy
Original Path: trunk/packages/last-align/branches/upstream/current

[svn-inject] Installing original source of last-align